{"id":1361,"date":"2019-12-16T19:11:33","date_gmt":"2019-12-16T16:11:33","guid":{"rendered":"https:\/\/galaxydata.ru\/community\/?p=1361"},"modified":"2025-07-22T19:08:33","modified_gmt":"2025-07-22T16:08:33","slug":"numa-amd-opteron-fast-server","status":"publish","type":"post","link":"https:\/\/galaxydata.ru\/community\/numa-amd-opteron-fast-server-1361","title":{"rendered":"NUMA AMD Opteron FAST SERVER"},"content":{"rendered":"<div class=\"content\">\n<div class=\"post\">\n<header class=\"post-header\">\n<h1 class=\"post-title\">The importance of Node Interleaving on AMD compute nodes<\/h1>\n<p class=\"post-meta\">Mar 4, 2014<\/p>\n<\/header>\n<article class=\"post-content\">Enabling Node Interleaving in the bios can greatly increase performance of a compute node. Node interleaving essentially lets the CPU decide where to put the memory, disabling it means that the user must explicitly tell where in memory to put data so that the associated CPU gets best performance.<\/p>\n<p>An explanation of Node Interleaving can be found\u00a0<a href=\"http:\/\/frankdenneman.nl\/2010\/12\/28\/node-interleaving-enable-or-disable\/\">here<\/a><\/p>\n<p>The end result, a 4-5x performance increase in terms of memory bandwidth.<\/p>\n<p>In our lab we have several 64 core AMD nodes with the following specs:<\/p>\n<ul>\n<li>Supermicro HBQGL-6F\/HBQGL-IF<\/li>\n<li>Supermicro 1042-LTF SuperServer<\/li>\n<\/ul>\n<table class=\"table table-condensed\">\n<thead>\n<tr>\n<th>Processor<\/th>\n<th>AMD 6274<\/th>\n<\/tr>\n<\/thead>\n<tbody>\n<tr>\n<td>Nickname<\/td>\n<td>Interlagos<\/td>\n<\/tr>\n<tr>\n<td>Clock (GHz)<\/td>\n<td>2.2<\/td>\n<\/tr>\n<tr>\n<td>Sockets\/Node<\/td>\n<td>4<\/td>\n<\/tr>\n<tr>\n<td>Cores\/Socket<\/td>\n<td>16<\/td>\n<\/tr>\n<tr>\n<td>NUMA\/Socket<\/td>\n<td>2<\/td>\n<\/tr>\n<tr>\n<td>DP GFlops\/Socket<\/td>\n<td>140.8<\/td>\n<\/tr>\n<tr>\n<td>Memory\/Socket<\/td>\n<td>32 GB<\/td>\n<\/tr>\n<tr>\n<td>Bandwidth\/Socket<\/td>\n<td>102.4 GB\/s<\/td>\n<\/tr>\n<tr>\n<td>DDR3<\/td>\n<td>1333 MHz<\/td>\n<\/tr>\n<tr>\n<td>L1 cache (excl.)<\/td>\n<td>16KB<\/td>\n<\/tr>\n<tr>\n<td>L2 cache\/# cores<\/td>\n<td>2MB\/2<\/td>\n<\/tr>\n<tr>\n<td>L3 cache\/# cores<\/td>\n<td>8MB\/8<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<p>I noticed a a few days ago that one of the nodes was performing horribly compared to the other so I decided to do some digging. I installed AMDAPPSDK on both machines and ran the clpeak benchmark with the following results:<\/p>\n<p>Bad Compute Node:<\/p>\n<figure class=\"highlight\">\n<pre><code class=\"language-bash\" data-lang=\"bash\"> \r\nPlatform: AMD Accelerated Parallel Processing\r\n  Device: AMD Opteron<span class=\"o\">(<\/span>TM<span class=\"o\">)<\/span> Processor 6274                 \r\n    Driver version  : 1214.3 <span class=\"o\">(<\/span>sse2,avx,fma4<span class=\"o\">)<\/span> <span class=\"o\">(<\/span>Linux x64<span class=\"o\">)<\/span>\r\n    Compute units   : 64\r\n    Clock frequency : 2200 MHz\r\n\r\n    Global memory bandwidth <span class=\"o\">(<\/span>GBPS<span class=\"o\">)<\/span>\r\n      float   : 9.22\r\n      float2  : 9.64\r\n      float4  : 9.95\r\n      float8  : 10.16\r\n      float16 : 9.99\r\n\r\n  \t...<\/code><\/pre>\n<\/figure>\n<p>Good Compute Node:<\/p>\n<figure class=\"highlight\">\n<pre><code class=\"language-bash\" data-lang=\"bash\"> \r\nPlatform: AMD Accelerated Parallel Processing\r\n  Device: AMD Opteron<span class=\"o\">(<\/span>TM<span class=\"o\">)<\/span> Processor 6274                 \r\n    Driver version  : 1214.3 <span class=\"o\">(<\/span>sse2,avx,fma4<span class=\"o\">)<\/span> <span class=\"o\">(<\/span>Linux x64<span class=\"o\">)<\/span>\r\n    Compute units   : 64\r\n    Clock frequency : 2205 MHz\r\n\r\n    Global memory bandwidth <span class=\"o\">(<\/span>GBPS<span class=\"o\">)<\/span>\r\n      float   : 37.66\r\n      float2  : 42.27\r\n      float4  : 58.08\r\n      float8  : 55.39\r\n      float16 : 43.31\r\n\r\n\t...<\/code><\/pre>\n<\/figure>\n<p>There is a 4-5x differerence in memory bandwidth! I omitted the Flop rates of both nodes as they were identical. By enabling Node interleaving, the performance increases dramatically.<\/p>\n<h3 id=\"Bios_Configuration\" >Section 1. Bios Configuration<\/h3>\n<p>Note that I will be talking about Bios version 2.0 here.<\/p>\n<p>I am going to provide the bios configuration of the faster machine for the CPU and the Memory options<\/p>\n<p>Bios-&gt;Advanced-&gt;Processor &amp; Clock Options<\/p>\n<figure class=\"highlight\">\n<pre><code class=\"language-bash\" data-lang=\"bash\"> \r\nGART Error <span class=\"o\">[<\/span>Disabled]\r\nMicrocode Update <span class=\"o\">[<\/span>Enabled]\r\nSecure Virtual Machine Mode <span class=\"o\">[<\/span>Disabled]\r\nPowerNow <span class=\"o\">[<\/span>Enabled]\r\nC State Mode <span class=\"o\">[<\/span>Disabled]\r\nPowerCap <span class=\"o\">[<\/span>P-state 0]\r\nHPC Mode <span class=\"o\">[<\/span>Disabled]\r\nCPB Mode <span class=\"o\">[<\/span>Auto]\r\nCPU DownCore Mode <span class=\"o\">[<\/span>Disabled]\r\nC1E Support <span class=\"o\">[<\/span>Auto]\r\nClock Spread Spectrum <span class=\"o\">[<\/span>Disabled]<\/code><\/pre>\n<\/figure>\n<p>Bios-&gt;Advanced-&gt;Advanced Chipset Control -&gt; NorthBridge Configuration<\/p>\n<figure class=\"highlight\">\n<pre><code class=\"language-bash\" data-lang=\"bash\"> \r\nHT Speed Support <span class=\"o\">[<\/span>Auto]\r\nIOMMU <span class=\"o\">[<\/span>Enabled]<\/code><\/pre>\n<\/figure>\n<p>Bios-&gt;Advanced-&gt;Advanced Chipset Control -&gt; NorthBridge Configuration -&gt;Memory Configuration<\/p>\n<figure class=\"highlight\">\n<pre class=\"\"><code class=\"language-bash\" data-lang=\"bash\"> \r\nBank Interleaving <span class=\"o\">[<\/span>Auto]\r\nNode Interleaving <span class=\"o\">[<\/span>Auto]\t\tTHE MOST IMPORTANT CHANGE\r\nChannel Interleaving <span class=\"o\">[<\/span>Auto]\r\nCS Sparing Enable <span class=\"o\">[<\/span>Disabled]\r\nBank Swizzle Mode <span class=\"o\">[<\/span>Enabled]<\/code><\/pre>\n<\/figure>\n<\/article>\n<\/div>\n<\/div>\n<footer class=\"site-footer\"><\/footer>\n","protected":false},"excerpt":{"rendered":"<p>The importance of Node Interleaving on AMD compute nodes Mar 4, 2014 Enabling Node Interleaving in the bios can greatly increase performance of a compute node. Node interleaving essentially lets&hellip; <\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[136],"tags":[],"class_list":["post-1361","post","type-post","status-publish","format-standard","hentry","category-servers"],"yoast_head":"<!-- This site is optimized with the Yoast SEO Premium plugin v25.4 (Yoast SEO v25.5) - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>NUMA AMD Opteron FAST SERVER - GalaxyData Community<\/title>\n<meta name=\"description\" content=\"Optimize NUMA architecture on AMD Opteron-based Fast Servers for enhanced performance. 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